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oligo HTA
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Oligo RMA normalization : ERROR; return code from pthread_create() is 22
microarray
normalization
oligo HTA
updated 2.5 years ago by
Harald
• 0 • written 5.7 years ago by
RV
▴ 10
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Comment: Conversion between different types of bioinformatic forms. (eg. NCBI protein to
by
MauriAndres
• 0
What if I want to perform the notation between the same database? For example, I want to convert ```gene_symbol``` to ```transcript``` to `…
Answer: DEseq 2 LFC shrinkage with apeglm in single-cell pseudobulk: strange volcano plo
by
ATpoint
★ 4.4k
There is nothing unusual here. There is simply no evidence for differential expression. Almost all genes are shrunken towards zero, due to …
Comment: EdgeR - Apparent Wrong Direction of logFC with Low Count Data
by
blmurphy
• 0
Hi Gordon. It was collation with my edgeR results, BASTA taxonomy, and function gene annotation tables. Prior to doing this last check for …
Answer: Poor dispersion fit in DESeq2
by
Michael Love
42k
The fit (red line) doesn't matter because you have so many samples. Note there is almost no shrinkage. Besides that you may be intereste…
Answer: DESeq2 analysis on 2 plant lines infected with virus, with 2 time points (days p
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Michael Love
42k
I'd recommend actually meeting with a local statistician to work out the analysis plan, or someone familiar with linear models in R. I h…
Votes
Answer: Conversion between different types of bioinformatic forms. (eg. NCBI protein to
Answer: Conversion between different types of bioinformatic forms. (eg. NCBI protein to
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
Comment: ISO a solution to rank-order introns by transcript
Answer: ISO a solution to rank-order introns by transcript
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